Package index • msens

Read

Fetch data, spatial and non-spatial, especially from APIs

get_species_by_feature(): Get species by feature

Taxonomic

Match taxa from APIs, especially World Register of Marine Species (WoRMS)

match_taxa(): Match taxa to spp.duckdb via cascade
wm_rest(): Query WoRMS REST API with multiple requests

Analyze

Analyses

Visualize

Plot and map Seascapes

ms_basemap(): Basemap

Data

Lookups for easy reference

ply_boemrgns: Polygons of BOEM Regions
ply_boemrgns_s05: Polygons of BOEM Regions, simplified to 5%
ply_ecoareas: Polygons of EcoAreas
ply_ecoareas_s05: Polygons of EcoAreas
ply_ecorgns: Polygons of Ecoregions
ply_ecorgns_s05: Polygons of Ecoregions
ply_planareas: Polygons of Planning Areas
ply_planareas_s05: Polygons of Planning Areas, simplified to 5%

Other

Other functions not defined by the concepts above

compute_er_score(): Compute extinction risk score from extrisk_code and flags
parse_noaa_status(): Parse NOAA protected_status field
sdm_db_con(): Connect to SDM DuckDB
sdm_db_path(): Path to SDM DuckDB
spp_db_con(): Connect to species taxonomy DuckDB